Yasuoka Laboratory


  • 2011年 (13 papers)
    • Kholmurodov, K., Dushanov, E., Yasuoka, K., Khalil, H., Galal, A., Ahmed, A., Sweilam, N. and Moharram, H., , "Molecular Dynamics Simulation of the Interaction of Ethanol - Water Mixture with a Pt Surface", Natural Science, 3, 1011-1021(2011). (11 pages.) DOI: 10.4236/ns.2011.312126

    • Takahashi, K. Z., Narumi, T., and Yasuoka, K., "A combination of the tree-code and IPS method to simulate large scale systems by molecular dynamics", J. Chem. Phys., 135, 174108(2011). (9 pages.) DOI: 10.1063/1.3658640

    • Kaneko, T., Akimoto, T., Yasuoka, K., Mitsutake, A., and Zeng, X. C., "Size Dependent Phase Changes in Water Clusters", J. Chem. Theory Comput., 7, 3083-3087(2011). (5 pages.) DOI: 10.1021/ct200458m

    • Akimoto, T., Yamamoto, E., Yasuoka, K., Hirano, Y., and Yasui, M., "Non-Gaussian Fluctuations Resulting from Power-Law Trapping in a Lipid Bilayer", Phys. Rev. Lett., 107, 178103(2011). DOI: 10.1103/PhysRevLett.107.178103

    • Kholmurodov, K., Dushanov, E., and Yasuoka, K., "MD Simulations of the P53 Oncoprotein Structure: the Effect of the Arg273-->His Mutation on the DNA Binding Domain", Advances in Bioscience and Biotechnology, 2, 330(2011). DOI: 10.4236/abb.2011.25048

    • Koishi, T., Yasuoka, K., Fujikawa, S., and Zeng, X. C., "Measurement of Contact-Angle Hysteresis for Droplets on Nanopillared Surface and in the Cassie and Wenzel States: A Molecular Dynamics Simulation Study", ACS Nano, 5, 6834(2011). DOI: 10.1021/nn2005393

    • Suh, D., and Yasuoka, K., "Nanoparticle Growth Analysis by Molecular Dynamics: Spherical Seed", J. Phys. Chem. B, 115, 10631(2011). DOI: 10.1021/jp201964h

    • Seino, M., Tanahashi, T., Yasuoka, K., "An Analysis of Natural Convection Using the Thermal Finite Element Discrete Boltzmann Equation", Computers and Fluids, 40, 113(2011). DOI: 10.1016/j.compfluid.2010.08.016

    • Takahashi, K. Z., Narumi, T., and Yasuoka, K., "Cutoff radius effect of the isotropic periodic sum and Wolf method in liquid-vapor interfaces of water", J. Chem. Phys., 134, 174112(2011). DOI: 10.1063/1.3578473

    • Sakamaki, R., Sum, A. K., Narumi, T., Ohmura, R., and Yasuoka, K., "Thermodynamic Properties of Methane/Water Interface Predicted by Molecular Dynamics Simulations", J. Chem. Phys., 134, 144702(2011). DOI: 10.1063/1.3579480

    • Sakamaki, R., Sum, A. K., Narumi, T., and Yasuoka, K., "Molecular dynamics simulations of vapor/liquid coexistence using the nonpolarizable water models ", J. Chem. Phys., 134, 124708(2011). DOI: 10.1063/1.3574038

    • Narumi, T., Hamada, T., Nitadori, K., Sakamaki, R., and Yasuoka, K., "Fast quasi double-precision method with single-precision hardware to accelerate scientific applications", Int. J. Comput. Meth., 8, 561(2011). DOI: 10.1142/S0219876211002708

    • Narumi, T., Yasuoka, K., Taiji, M., Zerbetto, F., and Hoefinger, S., "Fast Calculation of Electrostatic Potentials on the GPU or the ASIC MD-GRAPE-3", Comput. J., 54, 1181(2011). DOI: 10.1093/comjnl/bxq079

Yasuoka Laboratory